Journal cover Journal topic
Geoscientific Model Development An interactive open-access journal of the European Geosciences Union
Geosci. Model Dev., 10, 453-482, 2017
https://doi.org/10.5194/gmd-10-453-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
Model description paper
01 Feb 2017
Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry
Evgeniy V. Yakushev1,2, Elizaveta A. Protsenko1,2, Jorn Bruggeman3, Philip Wallhead4, Svetlana V. Pakhomova5,2,7, Shamil Kh. Yakubov2, Richard G. J. Bellerby6,4, and Raoul-Marie Couture1,8 1Norwegian Institute for Water Research (NIVA), Gaustadalléen 21, 0349 Oslo, Norway
2P.P. Shirshov Institute of Oceanology RAS, Nakhimovskiy prosp. 36, 117991, Moscow, Russia
3Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH, UK
4Norwegian Institute for Water Research (NIVA Vest), Thormøhlensgate 53 D, 5006 Bergen, Norway
5Norwegian Institute for Air Research (NILU), P.O. Box 100, 2027 Kjeller, Norway
6State Key Laboratory for Estuarine and Coastal Research, East China Normal University, Shanghai, China
7Norwegian University of Science and Technology (NTNU), 7491 Trondheim, Norway
8University of Waterloo, Earth and Environmental Sciences, Ecohydrology Group, 200 University Avenue West, N2L3G2, Waterloo, Canada
Abstract. Interactions between seawater and benthic systems play an important role in global biogeochemical cycling. Benthic fluxes of some chemical elements (e.g., C, N, P, O, Si, Fe, Mn, S) alter the redox state and marine carbonate system (i.e., pH and carbonate saturation state), which in turn modulate the functioning of benthic and pelagic ecosystems. The redox state of the near-bottom layer in many regions can change with time, responding to the supply of organic matter, physical regime, and coastal discharge. We developed a model (BROM) to represent key biogeochemical processes in the water and sediments and to simulate changes occurring in the bottom boundary layer. BROM consists of a transport module (BROM-transport) and several biogeochemical modules that are fully compatible with the Framework for the Aquatic Biogeochemical Models, allowing independent coupling to hydrophysical models in 1-D, 2-D, or 3-D. We demonstrate that BROM is capable of simulating the seasonality in production and mineralization of organic matter as well as the mixing that leads to variations in redox conditions. BROM can be used for analyzing and interpreting data on sediment–water exchange, and for simulating the consequences of forcings such as climate change, external nutrient loading, ocean acidification, carbon storage leakage, and point-source metal pollution.

Citation: Yakushev, E. V., Protsenko, E. A., Bruggeman, J., Wallhead, P., Pakhomova, S. V., Yakubov, S. Kh., Bellerby, R. G. J., and Couture, R.-M.: Bottom RedOx Model (BROM v.1.1): a coupled benthic–pelagic model for simulation of water and sediment biogeochemistry, Geosci. Model Dev., 10, 453-482, https://doi.org/10.5194/gmd-10-453-2017, 2017.
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This paper presents a new benthic–pelagic biogeochemical model (BROM) that combines a relatively simple pelagic ecosystem model with a detailed biogeochemical model of the coupled cycles of N, P, Si, C, O, S, Mn, Fe in the water column, benthic boundary layer, and sediments, with a focus on oxygen and redox state. BROM should be of interest for the study of a range of environmental applications in addition to hypoxia, such as benthic nutrient recycling, redox biogeochemistry, and eutrophication.
This paper presents a new benthic–pelagic biogeochemical model (BROM) that combines a...
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