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Geoscientific Model Development An interactive open-access journal of the European Geosciences Union
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Volume 11, issue 6 | Copyright
Geosci. Model Dev., 11, 2541-2562, 2018
© Author(s) 2018. This work is distributed under
the Creative Commons Attribution 4.0 License.

Model description paper 29 Jun 2018

Model description paper | 29 Jun 2018

Geodynamic diagnostics, scientific visualisation and StagLab 3.0

Fabio Crameri Fabio Crameri
  • Centre for Earth Evolution and Dynamics (CEED), University of Oslo, P.O. Box 1028 Blindern, 0315 Oslo, Norway

Abstract. Today's geodynamic models can, often do and sometimes have to become very complex. Their underlying, increasingly elaborate numerical codes produce a growing amount of raw data. Post-processing such data is therefore becoming more and more important, but also more challenging and time-consuming. In addition, visualising processed data and results has, in times of coloured figures and a wealth of half-scientific software, become one of the weakest pillars of science, widely mistreated and ignored. Efficient and automated geodynamic diagnostics and sensible scientific visualisation preventing common pitfalls is thus more important than ever. Here, a collection of numerous diagnostics for plate tectonics and mantle dynamics is provided and a case for truly scientific visualisation is made. Amongst other diagnostics are a most accurate and robust plate-boundary identification, slab-polarity recognition, plate-bending derivation, surface-topography component splitting and mantle-plume detection. Thanks to powerful image processing tools and other elaborate algorithms, these and many other insightful diagnostics are conveniently derived from only a subset of the most basic parameter fields. A brand new set of scientific quality, perceptually uniform colour maps including devon, davos, oslo and broc is introduced and made freely available (, last access: 25 June 2018). These novel colour maps bring a significant advantage over misleading, non-scientific colour maps like rainbow, which is shown to introduce a visual error to the underlying data of up to 7.5%. Finally, StagLab (, last access: 25 June 2018) is introduced, a software package that incorporates the whole suite of automated geodynamic diagnostics and, on top of that, applies state-of-the-art scientific visualisation to produce publication-ready figures and movies, all in the blink of an eye and all fully reproducible. StagLab, a simple, flexible, efficient and reliable tool made freely available to everyone, is written in MATLAB and adjustable for use with geodynamic mantle convection codes.

Publications Copernicus
Short summary
Firstly, this study acts as a compilation of key geodynamic diagnostics and describes how to automatise them for a more efficient scientific procedure. Secondly, it outlines today's key pitfalls of scientific visualisation and provides means to circumvent them with, for example, a novel set of fully scientific colour maps. Thirdly, it introduces StagLab 3.0, a software that applies such fully automated diagnostics and state-of-the-art visualisation in the blink of an eye.
Firstly, this study acts as a compilation of key geodynamic diagnostics and describes how to...