Articles | Volume 13, issue 1
https://doi.org/10.5194/gmd-13-169-2020
https://doi.org/10.5194/gmd-13-169-2020
Model description paper
 | 
27 Jan 2020
Model description paper |  | 27 Jan 2020

AtChem (version 1), an open-source box model for the Master Chemical Mechanism

Roberto Sommariva, Sam Cox, Chris Martin, Kasia Borońska, Jenny Young, Peter K. Jimack, Michael J. Pilling, Vasileios N. Matthaios, Beth S. Nelson, Mike J. Newland, Marios Panagi, William J. Bloss, Paul S. Monks, and Andrew R. Rickard

Related authors

Radical chemistry and ozone production at a UK coastal receptor site
Robert Woodward-Massey, Roberto Sommariva, Lisa K. Whalley, Danny R. Cryer, Trevor Ingham, William J. Bloss, Stephen M. Ball, Sam Cox, James D. Lee, Chris P. Reed, Leigh R. Crilley, Louisa J. Kramer, Brian J. Bandy, Grant L. Forster, Claire E. Reeves, Paul S. Monks, and Dwayne E. Heard
Atmos. Chem. Phys., 23, 14393–14424, https://doi.org/10.5194/acp-23-14393-2023,https://doi.org/10.5194/acp-23-14393-2023, 2023
Short summary
Measurement report: Carbonyl sulfide production during dimethyl sulfide oxidation in the atmospheric simulation chamber SAPHIR
Marc von Hobe, Domenico Taraborrelli, Sascha Alber, Birger Bohn, Hans-Peter Dorn, Hendrik Fuchs, Yun Li, Chenxi Qiu, Franz Rohrer, Roberto Sommariva, Fred Stroh, Zhaofeng Tan, Sergej Wedel, and Anna Novelli
Atmos. Chem. Phys., 23, 10609–10623, https://doi.org/10.5194/acp-23-10609-2023,https://doi.org/10.5194/acp-23-10609-2023, 2023
Short summary
Experimental chemical budgets of OH, HO2, and RO2 radicals in rural air in western Germany during the JULIAC campaign 2019
Changmin Cho, Hendrik Fuchs, Andreas Hofzumahaus, Frank Holland, William J. Bloss, Birger Bohn, Hans-Peter Dorn, Marvin Glowania, Thorsten Hohaus, Lu Liu, Paul S. Monks, Doreen Niether, Franz Rohrer, Roberto Sommariva, Zhaofeng Tan, Ralf Tillmann, Astrid Kiendler-Scharr, Andreas Wahner, and Anna Novelli
Atmos. Chem. Phys., 23, 2003–2033, https://doi.org/10.5194/acp-23-2003-2023,https://doi.org/10.5194/acp-23-2003-2023, 2023
Short summary
Seasonal variation in nitryl chloride and its relation to gas-phase precursors during the JULIAC campaign in Germany
Zhaofeng Tan, Hendrik Fuchs, Andreas Hofzumahaus, William J. Bloss, Birger Bohn, Changmin Cho, Thorsten Hohaus, Frank Holland, Chandrakiran Lakshmisha, Lu Liu, Paul S. Monks, Anna Novelli, Doreen Niether, Franz Rohrer, Ralf Tillmann, Thalassa S. E. Valkenburg, Vaishali Vardhan, Astrid Kiendler-Scharr, Andreas Wahner, and Roberto Sommariva
Atmos. Chem. Phys., 22, 13137–13152, https://doi.org/10.5194/acp-22-13137-2022,https://doi.org/10.5194/acp-22-13137-2022, 2022
Short summary
Daily evolution of VOCs in Beijing: chemistry, emissions, transport, and policy implications
Marios Panagi, Roberto Sommariva, Zoë L. Fleming, Paul S. Monks, Gongda Lu, Eloise A. Marais, James R. Hopkins, Alastair C. Lewis, Qiang Zhang, James D. Lee, Freya A. Squires, Lisa K. Whalley, Eloise J. Slater, Dwayne E. Heard, Robert Woodward-Massey, Chunxiang Ye, and Joshua D. Vande Hey
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acp-2022-379,https://doi.org/10.5194/acp-2022-379, 2022
Revised manuscript not accepted
Short summary

Related subject area

Atmospheric sciences
Modelling wind farm effects in HARMONIE–AROME (cycle 43.2.2) – Part 1: Implementation and evaluation
Jana Fischereit, Henrik Vedel, Xiaoli Guo Larsén, Natalie E. Theeuwes, Gregor Giebel, and Eigil Kaas
Geosci. Model Dev., 17, 2855–2875, https://doi.org/10.5194/gmd-17-2855-2024,https://doi.org/10.5194/gmd-17-2855-2024, 2024
Short summary
Analytical and adaptable initial conditions for dry and moist baroclinic waves in the global hydrostatic model OpenIFS (CY43R3)
Clément Bouvier, Daan van den Broek, Madeleine Ekblom, and Victoria A. Sinclair
Geosci. Model Dev., 17, 2961–2986, https://doi.org/10.5194/gmd-17-2961-2024,https://doi.org/10.5194/gmd-17-2961-2024, 2024
Short summary
Challenges of constructing and selecting the “perfect” boundary conditions for the large-eddy simulation model PALM
Jelena Radović, Michal Belda, Jaroslav Resler, Kryštof Eben, Martin Bureš, Jan Geletič, Pavel Krč, Hynek Řezníček, and Vladimír Fuka
Geosci. Model Dev., 17, 2901–2927, https://doi.org/10.5194/gmd-17-2901-2024,https://doi.org/10.5194/gmd-17-2901-2024, 2024
Short summary
A machine learning approach for evaluating Southern Ocean cloud radiative biases in a global atmosphere model
Sonya L. Fiddes, Marc D. Mallet, Alain Protat, Matthew T. Woodhouse, Simon P. Alexander, and Kalli Furtado
Geosci. Model Dev., 17, 2641–2662, https://doi.org/10.5194/gmd-17-2641-2024,https://doi.org/10.5194/gmd-17-2641-2024, 2024
Short summary
Decision Support System version 1.0 (DSS v1.0) for air quality management in Delhi, India
Gaurav Govardhan, Sachin D. Ghude, Rajesh Kumar, Sumit Sharma, Preeti Gunwani, Chinmay Jena, Prafull Yadav, Shubhangi Ingle, Sreyashi Debnath, Pooja Pawar, Prodip Acharja, Rajmal Jat, Gayatry Kalita, Rupal Ambulkar, Santosh Kulkarni, Akshara Kaginalkar, Vijay K. Soni, Ravi S. Nanjundiah, and Madhavan Rajeevan
Geosci. Model Dev., 17, 2617–2640, https://doi.org/10.5194/gmd-17-2617-2024,https://doi.org/10.5194/gmd-17-2617-2024, 2024
Short summary

Cited articles

Abbatt, J., George, C., Melamed, M., Monks, P., Pandis, S., and Rudich, Y.: Fundamentals of atmospheric chemistry: keeping a three-legged stool balanced, Atmos. Environ., 84, 390–391, https://doi.org/10.1016/j.atmosenv.2013.10.025, 2014. a
Bloss, C., Wagner, V., Bonzanini, A., Jenkin, M. E., Wirtz, K., Martin-Reviejo, M., and Pilling, M. J.: Evaluation of detailed aromatic mechanisms (MCMv3 and MCMv3.1) against environmental chamber data, Atmos. Chem. Phys., 5, 623–639, https://doi.org/10.5194/acp-5-623-2005, 2005a. a
Bloss, C., Wagner, V., Jenkin, M. E., Volkamer, R., Bloss, W. J., Lee, J. D., Heard, D. E., Wirtz, K., Martin-Reviejo, M., Rea, G., Wenger, J. C., and Pilling, M. J.: Development of a detailed chemical mechanism (MCMv3.1) for the atmospheric oxidation of aromatic hydrocarbons, Atmos. Chem. Phys., 5, 641–664, https://doi.org/10.5194/acp-5-641-2005, 2005b. a
Bonet, F. J., Pérez-Pérez, R., Benito, B. M., de Albuquerque, F. S., and Zamora, R.: Documenting, storing, and executing models in ecology: a conceptual framework and real implementation in a global change monitoring program, Environ. Modell. Softw., 52, 192–199, https://doi.org/10.1016/j.envsoft.2013.10.027, 2014. a
Brauers, T., Hausmann, M., Bister, A., Kraus, A., and Dorn, H.-P.: OH radicals in the boundary layer of the Atlantic Ocean: 1. Measurements by long-path laser absorption spectroscopy, J. Geophys. Res., 106, 7399–7414, https://doi.org/10.1029/2000JD900679, 2001. a
Download
Short summary
This paper presents the AtChem software, which can be used to build box models for atmospheric chemistry studies. The software is designed to facilitate the use of one of the most important chemical mechanisms used by atmospheric scientists, the Master Chemical Mechanism. AtChem exists in two versions: an on-line application for laboratory studies and educational or outreach activities and an offline version for more complex models and batch simulations. AtChem is open source under MIT License.