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Geoscientific Model Development An interactive open-access journal of the European Geosciences Union
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Volume 8, issue 3
Geosci. Model Dev., 8, 595-602, 2015
https://doi.org/10.5194/gmd-8-595-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
Geosci. Model Dev., 8, 595-602, 2015
https://doi.org/10.5194/gmd-8-595-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.

Model description paper 13 Mar 2015

Model description paper | 13 Mar 2015

Development of a grid-independent GEOS-Chem chemical transport model (v9-02) as an atmospheric chemistry module for Earth system models

M. S. Long1, R. Yantosca1, J. E. Nielsen2,3, C. A. Keller1, A. da Silva2, M. P. Sulprizio1, S. Pawson2, and D. J. Jacob1 M. S. Long et al.
  • 1School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA
  • 2Global Modeling and Assimilation Office, NASA Goddard Space Flight Center, Greenbelt, MD, USA
  • 3Science Systems and Applications Inc., Lanham, MD, USA

Abstract. The GEOS-Chem global chemical transport model (CTM), used by a large atmospheric chemistry research community, has been re-engineered to also serve as an atmospheric chemistry module for Earth system models (ESMs). This was done using an Earth System Modeling Framework (ESMF) interface that operates independently of the GEOS-Chem scientific code, permitting the exact same GEOS-Chem code to be used as an ESM module or as a stand-alone CTM. In this manner, the continual stream of updates contributed by the CTM user community is automatically passed on to the ESM module, which remains state of science and referenced to the latest version of the standard GEOS-Chem CTM. A major step in this re-engineering was to make GEOS-Chem grid independent, i.e., capable of using any geophysical grid specified at run time. GEOS-Chem data sockets were also created for communication between modules and with external ESM code. The grid-independent, ESMF-compatible GEOS-Chem is now the standard version of the GEOS-Chem CTM. It has been implemented as an atmospheric chemistry module into the NASA GEOS-5 ESM. The coupled GEOS-5–GEOS-Chem system was tested for scalability and performance with a tropospheric oxidant-aerosol simulation (120 coupled species, 66 transported tracers) using 48–240 cores and message-passing interface (MPI) distributed-memory parallelization. Numerical experiments demonstrate that the GEOS-Chem chemistry module scales efficiently for the number of cores tested, with no degradation as the number of cores increases. Although inclusion of atmospheric chemistry in ESMs is computationally expensive, the excellent scalability of the chemistry module means that the relative cost goes down with increasing number of cores in a massively parallel environment.

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This paper presents results from the modularization of the GEOS-Chem chemical transport model, and its coupling as the chemical operator within the NASA-GMAO GEOS-5 Earth system model (ESM). The key findings are that chemistry within the modular GEOS-Chem system shows consistent, high strong-scaling properties across the range of distributed processors, transport is the limiting component prohibiting efficient scalability, and GEOS-Chem is able to generate suitable chemical results in an ESM.
This paper presents results from the modularization of the GEOS-Chem chemical transport model,...
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